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© Laboratory of Proteomics for Drug Discovery, Center for Drug Design Research, National Institutes of Biomedical Innovation, Health and Nutrition

Publications

2023

  1. Hasegawa N, Hongo M, Okada M, Kuga T, Abe Y, Adachi J, Tomonaga T, Yamaguchi N, Nakayama Y. Phosphotyrosine proteomics in cells synchronized at monopolar cytokinesis reveals EphA2 as functioning in cytokinesis. Exp Cell Res. 432(1) 113783-113783. 2023. DOI: 10.1016/j.yexcr.2023.11378
  2. Kanao E, Ishida K, Mizuta R, Li Y, Imami K, Tanigawa T, Sasaki Y, Akiyoshi K, Adachi J, Otsuka K, Ishihama Y, Kubo T. Rapid and Highly Efficient Purification of Extracellular Vesicles Enabled by a TiO2 Hybridized Spongy-like Polymer. Anal Chem. 411. 2023. DOI:  10.1021/acs.analchem.3c03411
  3. Igarashi T, Mazevet M, Yasuhara T, Yano K, Mochizuki A, Nishino M,  Yoshida T, Yoshida Y, Takamatsu N, Yoshimi A, Shiraishi K, Horinouchi H,  Kohno T, Hamamoto R, Adachi J, Zou L,  Shiotani B. An ATR-PrimPol pathway confers tolerance to oncogenic KRAS-induced and heterochromatin-associated replication stress. Nat Commun. 14(1), 2023.  DOI: 10.1038/s41467-023-40578-2
  4. Oka M, Otani M, Miyamoto Y, Oshima R, Adachi J, Tomonaga T, Asally M, Nagaoka Y, Tanaka K, Toyoda A,  Ichikawa K, Morishita S, Isono K, Koseki H, Nakato R, Ohkawa, Yoneda Y. Phase-separated nuclear bodies of nucleoporin fusions promote condensation of MLL1/CRM1 and rearrangement of 3D genome structure. Cell rep. 42(8) 112884-112884. 2023. DOI: 10.1016/j.celrep.2023.1128
  5. Kanao E, Osaki H, Tanigawa T, Takaya H, Sano T, Adachi J, Otsuka K, Ishihama Y, Kubo T. Rational Supramolecular Strategy via Halogen Bonding for Effective Halogen Recognition in Molecular Imprinting. Anal Chem. 2023. DOI: 10.1021/acs.analchem.3c01311
  6. Nojima Y, Aoki M, Re S, Hirano H, Abe Y, Narumi R, Muraoka S, Shoji H, Honda K, Tomonaga T, Mizuguchi K, Boku N, Adachi J*. Integration of pharmacoproteomic and computational approaches reveals the cellular signal transduction pathways affected by apatinib in gastric cancer cell lines. Comput Struct Biotechnol J. 21:2172-2187. 2023. DOI: 10.1016/j.csbj.2023.03.006
  7. Dai T, Adachi J, Dai Y, Nakano N, Yamato M, Kikuchi S, Usui S, Minami Y, Tomonaga T, Noguchi M, Matsubara D, Sakamoto N. In-depth proteomics reveals the characteristic developmental profiles of early lung adenocarcinoma with epidermal growth factor receptor mutation. Cancer Med. 12(9):10755-10767. 2023. DOI: 10.1002/cam4.5766
  8. Takimoto Y, Tsubamoto H, Taniguchi R, Sakata K, Takada Y, Adachi J, Tomonaga T, Ueda T, Nakagawa K, Narita S, Wakimoto YU, Shibahara H. Itraconazole Repolarizes Tumor-associated Macrophages and Suppresses Cervical Cancer Cell Growth. Anticancer Res. 2023 Feb;43(2):569-580. DOI: 10.21873/anticanres.16193
  9. Gunji D, Narumi R, Muraoka S, Isoyama J, Ikemoto N, Ishida M, Tomonaga T, Sakai Y, Obama K, Adachi J. Integrative analysis of cancer dependency data and comprehensive phosphoproteomics data revealed the EPHA2-PARD3 axis as a cancer vulnerability in KRAS-mutant colorectal cancer. Molecular Omics. 19(8), 624-639. 2023. DOI:10.1039/D3MO00042G
  10. Kameyama T, Miyata M, Shiotani H, Adachi J, Kakuta S, Uchiyama Y, Mizutani K, Takai Y. Heterogeneity of perivascular astrocyte endfeet depending on vascular regions in the mouse brain. iScience. 26(10):108010. 2023. DOI: 10.1016/j.isci.2023.108010.
  11. Adachi J*, Abe Y, Narumi R, Muraoka S, Gunji D, Hara Y, Tomonaga T. Data for proteomic analysis of Dox-induced ALK interactome, phosphotyrosine signal and ALK-mutant neuroblastoma cells. J. Proteome Data and Methods. 5, 15. 2023. DOI: https://doi.org/10.14889/jpdm.2023.0015
  12. Kanao E*, Osaki H, Tanigawa T, Takaya H, Sano T, Adachi J, Otsuka K, Ishihama Y, Kubo T. Rational Supramolecular Strategy via Halogen Bonding for Effective Halogen Recognition in Molecular Imprinting.  Anal Chem. 95, 9304, 2023. DOI: 10.1021/acs.analchem.3c01311.
  13. Kanao E*, Ishida K, Mizuta R, Li Y, Imami K, Tanigawa T, Sasaki Y, Akiyoshi K, Adachi J, Otsuka K, Ishihama Y, Kubo T. Rapid and Highly Efficient Purification of Extracellular Vesicles Enabled by a TiO2 Hybridized Spongy-like Polymer. Anal Chem. 95, 14502, 2023. DOI: 10.1021/acs.analchem.3c03411.