- Hara Y., Kawasaki N., Hirano K., Hashimoto Y., Adachi J., Watanabe S., and Tomonaga T.* (2013). Quantitative proteomic analysis of cultured skin fibroblast cells derived from patients with triglyceride deposit cardiomyovasculopathy. Orphanet Journal of Rare Diseases 8, 197. DOI: 10.1186/1750-1172-8-197
- Aoyama K., Yuki R., Horiike Y., Kubota S., Yamaguchi N., Morii M., Ishibashi K., Nakayama Y., Kuga T., Hashimoto Y., Tomonaga T., Yamaguchi N. (2013). Formation of long and winding nuclear F-actin bundles by nuclear c-Abl tyrosine kinase. Exp Cell Res 319, 3251-68. DOI: 10.1016/j.yexcr.2013.09.003
- Kuga, T., Kume, H., Kawasaki, N., Sato, M., Adachi, J., Shiromizu, T., Hoshino, I., Nishimori, T., Matsubara, H., and Tomonaga, T. (2013). A novel mechanism of keratin cytoskeleton organization through casein kinase Ialpha and FAM83H in colorectal cancer. J Cell Sci 126, 4721-31. DOI: 10.1242/jcs.129684
- Kubota, S., Fukumoto, Y., Aoyama, K., Ishibashi, K., Yuki, R., Morinaga, T., Honda, T., Yamaguchi, N., Hashimoto, Y., Kuga, T., Tomonaga, T., et al. (2013). Phosphorylation of KRAB-associated Protein 1 (KAP1) at Tyr-449, Tyr-458, and Tyr-517 by Nuclear Tyrosine Kinases Inhibits the Association of KAP1 and Heterochromatin Protein 1alpha (HP1alpha) with Heterochromatin. J Biol Chem 288, 17871-17883. DOI: 10.1074/jbc.M112.437756
- Muraoka, S., Kume, H., Adachi, J., Shiromizu, T., Watanabe, S., Masuda, T., Ishihama, Y., and Tomonaga, T. (2013). In-depth Membrane Proteomic Study of Breast Cancer Tissues for the Generation of a Chromosome-based Protein List. J Proteome Res 12, 208-213. DOI: 10.1021/pr300824m
- Shiromizu, T., Adachi, J., Watanabe, S., Murakami, T., Kuga, T., Muraoka, S., and Tomonaga, T. (2013). Identification of Missing Proteins in the neXtProt Database and Unregistered Phosphopeptides in the PhosphoSitePlus Database As Part of the Chromosome-Centric Human Proteome Project. J Proteome Res 12, 2414-2421. DOI: 10.1021/pr300825v
- Sogawa, K., Noda, K., Umemura, H., Seimiya, M., Kuga, T., Tomonaga, T., Nishimura, M., Kanai, F., Imazeki, F., Takizawa, H., et al. (2013). Serum fibrinogen alpha C-chain 5.9 kDa fragment as a biomarker for early detection of hepatic fibrosis related to hepatitis C virus. Proteomics Clin Appl 7, 424-431. DOI: 10.1002/prca.201200094
- Yamamoto, T., Nakayama, K., Hirano, H., Tomonaga, T., Ishihama, Y., Yamada, T., Kondo, T., Kodera, Y., Sato, Y., Araki, N., et al. (2013). Integrated View of the Human Chromosome X-centric Proteome Project. J Proteome Res 12, 58-61. DOI: 10.1021/pr300844p
- Guo, F., Hiroshima, K., Wu, D., Satoh, M., Abulazi, M., Nomura, F., Yoshino, I., Tomonaga, T., and Nakatani, Y. (2013). Prohibitin and its rapidly emerging role as a biomarker of systemic malignancies-reply. Hum Pathol 44, 679-680. DOI: 10.1016/j.humpath.2012.12.008
- Kajiwara, T., Matsushita, K., Itoga, S., Tamura, M., Tanaka, N., Tomonaga, T., Matsubara, H., Shimada, H., Habara, Y., Matsuo, M., et al. (2013). SAP155-mediated c-myc suppressor far-upstream element-binding protein-interacting repressor splicing variants are activated in colon cancer tissues. Cancer Sci 104, 149-156. DOI: 10.1111/cas.12058
- Kimura, K., Ojima, H., Kubota, D., Sakumoto, M., Nakamura, Y., Tomonaga, T., Kosuge, T., and Kondo, T. (2013). Proteomic identification of the macrophage-capping protein as a protein contributing to the malignant features of hepatocellular carcinoma. J Proteomics 78, 362-373. DOI: 10.1016/j.jprot.2012.10.004
- Matsushita, K., Tamura, M., Tanaka, N., Tomonaga, T., Matsubara, H., Shimada, H., Levens, D., He, L., Liu, J., Yoshida, M., et al. (2013). Interactions between SAP155 and FUSE-Binding Protein-Interacting Repressor Bridges c-Myc and P27Kip1 Expression. Mol Cancer Res 11, 689-698. DOI: 10.1158/1541-7786.MCR-12-0673
- Yamada, M., Satoh, M., Seimiya, M., Sogawa, K., Itoga, S., Tomonaga, T., and Nomura, F. (2013). Combined proteomic analysis of liver tissue and serum in chronically alcohol-fed rats. Alcohol Clin Exp Res 37 Suppl 1, E79-87. DOI: 10.1111/j.1530-0277.2012.01883.x
